The difficulty in getting data from the raw speed, it that the electronic speed controller is changing the speed many times per second under normal conditions. If you look at the motor loading graph, which is the green one I think, the motor loading is the lowest. This would indicate that there is nothing dragging the motor down more than any of the other motors. Are the props on or off? If they are on, it would probably mean that the prop has slightly less air drag.
I don't see anything abnormal in these traces. The sound files are not definitive. I'm with the others in thinking that if the ac flys normally, with no problems with hover or tracking, that the systems are ok, for the times that that is true. The shift in sound is concerning, although I gouldn't get anything from the sound clips, that told me anything. If the noise happened during the time the traces were plotted, I would expect any drag on the motor from damage to show up as a sharp increase in the motor loading, as the ESC worked to keep the motor turning at its required instantaneous speed. To be safe, you could replace the noisy motor, although I see no indication that it is required from the data available.